WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30G4.4k.1 Sequence Name  C30G4.4k.1
Length (nt)  741   Chromosome Location  X: 17057163-17066714
Chromosome . Primary Identifier  X Chromosome Location . Start  17057163
Chromosome Location . End  17066714 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30G4.4k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016269 C30G4.4 C30G4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30G4.4k C30G4.4k 741   X: 17057163-17057238

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30G4.4k.1 17057163 17066714 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265279   76   X: 17057163-17057238 Caenorhabditis elegans
Exon265300   92   X: 17057288-17057379 Caenorhabditis elegans
Exon265320   64   X: 17058183-17058246 Caenorhabditis elegans
Exon265334   27   X: 17059198-17059224 Caenorhabditis elegans
Exon265349   76   X: 17059318-17059393 Caenorhabditis elegans
Exon265365   61   X: 17059649-17059709 Caenorhabditis elegans
Exon265384   158   X: 17065124-17065281 Caenorhabditis elegans
Exon265398   62   X: 17066012-17066073 Caenorhabditis elegans
Exon265414   20   X: 17066122-17066141 Caenorhabditis elegans
Exon265425   78   X: 17066476-17066553 Caenorhabditis elegans
Exon265430   27   X: 17066688-17066714 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30G4.4k.1 17057163 17066714 -1

1 Sequence

Length
741

1 Sequence Ontology Term

Identifier Name Description
transcript