WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C08A9.3b Sequence Name  C08A9.3b
Length (nt)  2220   Chromosome Location  X: 17087882-17088290
Chromosome . Primary Identifier  X Chromosome Location . Start  17087882
Chromosome Location . End  17088290
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08A9.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40635 C08A9.3, isoform b 84.5 739 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00040051
WBRNAi00040052
WBRNAi00040053
WBRNAi00010417
WBRNAi00010418
WBRNAi00010419
WBRNAi00028654

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C08A9.3b 17087882 17088290 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015583 C08A9.3 C08A9.3 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:C08A9.3b 17087882 17088290 -1
CDS:C08A9.3b 17088336 17088481 -1
CDS:C08A9.3b 17088529 17088630 -1
CDS:C08A9.3b 17088682 17088818 -1
CDS:C08A9.3b 17089221 17089582 -1
CDS:C08A9.3b 17089625 17089805 -1
CDS:C08A9.3b 17089852 17089920 -1
CDS:C08A9.3b 17090058 17090126 -1
CDS:C08A9.3b 17090170 17090245 -1
CDS:C08A9.3b 17090293 17090382 -1
CDS:C08A9.3b 17090424 17090514 -1
CDS:C08A9.3b 17090963 17091013 -1
CDS:C08A9.3b 17091063 17091151 -1
CDS:C08A9.3b 17091199 17091288 -1
CDS:C08A9.3b 17091336 17091434 -1
CDS:C08A9.3b 17091554 17091712 -1

1 Sequence

Length
2220

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C08A9.3b.1 C08A9.3b.1 2220   X: 17087882-17091712