WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09E3.7.1 Sequence Name  K09E3.7.1
Length (nt)  2752   Chromosome Location  X: 17131348-17134527
Chromosome . Primary Identifier  X Chromosome Location . Start  17131348
Chromosome Location . End  17134527 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09E3.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019578 K09E3.7 K09E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09E3.7 K09E3.7 2580   X: 17131485-17131718

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09E3.7.1 17131348 17134527 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265547   371   X: 17131348-17131718 Caenorhabditis elegans
Exon265548   354   X: 17131765-17132118 Caenorhabditis elegans
Exon265549   354   X: 17132165-17132518 Caenorhabditis elegans
Exon265550   354   X: 17132565-17132918 Caenorhabditis elegans
Exon265551   543   X: 17132969-17133511 Caenorhabditis elegans
Exon265552   684   X: 17133703-17134386 Caenorhabditis elegans
Exon265553   92   X: 17134436-17134527 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09E3.7.1 17131348 17134527 -1

1 Sequence

Length
2752

1 Sequence Ontology Term

Identifier Name Description
transcript