WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23C6.1.1 Sequence Name  T23C6.1.1
Length (nt)  1744   Chromosome Location  X: 17151522-17154647
Chromosome . Primary Identifier  X Chromosome Location . Start  17151522
Chromosome Location . End  17154647 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23C6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007011 mdt-1.2 T23C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23C6.1 T23C6.1 1569   X: 17151523-17151693

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23C6.1.1 17151522 17154647 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265563   172   X: 17151522-17151693 Caenorhabditis elegans
Exon265564   134   X: 17151756-17151889 Caenorhabditis elegans
Exon265565   228   X: 17152594-17152821 Caenorhabditis elegans
Exon265566   105   X: 17152886-17152990 Caenorhabditis elegans
Exon265567   189   X: 17153034-17153222 Caenorhabditis elegans
Exon265568   310   X: 17153270-17153579 Caenorhabditis elegans
Exon265569   178   X: 17153869-17154046 Caenorhabditis elegans
Exon265570   112   X: 17154093-17154204 Caenorhabditis elegans
Exon265571   316   X: 17154332-17154647 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23C6.1.1 17151522 17154647 1

1 Sequence

Length
1744

1 Sequence Ontology Term

Identifier Name Description
transcript