WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23C6.5.1 Sequence Name  T23C6.5.1
Length (nt)  1307   Chromosome Location  X: 17155088-17157968
Chromosome . Primary Identifier  X Chromosome Location . Start  17155088
Chromosome Location . End  17157968 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23C6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020727 npr-21 T23C6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23C6.5 T23C6.5 1089   X: 17155295-17155390

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23C6.5.1 17155088 17157968 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265572   303   X: 17155088-17155390 Caenorhabditis elegans
Exon265573   149   X: 17155445-17155593 Caenorhabditis elegans
Exon265575   97   X: 17155654-17155750 Caenorhabditis elegans
Exon265576   166   X: 17156177-17156342 Caenorhabditis elegans
Exon265577   77   X: 17156395-17156471 Caenorhabditis elegans
Exon265578   77   X: 17156709-17156785 Caenorhabditis elegans
Exon265579   106   X: 17156838-17156943 Caenorhabditis elegans
Exon265580   153   X: 17156996-17157148 Caenorhabditis elegans
Exon265581   80   X: 17157200-17157279 Caenorhabditis elegans
Exon265582   99   X: 17157870-17157968 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23C6.5.1 17155088 17157968 -1

1 Sequence

Length
1307

1 Sequence Ontology Term

Identifier Name Description
transcript