WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0302.1b.1 Sequence Name  B0302.1b.1
Length (nt)  3720   Chromosome Location  X: 17186380-17193292
Chromosome . Primary Identifier  X Chromosome Location . Start  17186380
Chromosome Location . End  17193292 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0302.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002207 sid-3 B0302.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0302.1b B0302.1b 3393   X: 17186388-17186537

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0302.1b.1 17186380 17193292 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265617   158   X: 17186380-17186537 Caenorhabditis elegans
Exon265620   168   X: 17186583-17186750 Caenorhabditis elegans
Exon265623   141   X: 17187158-17187298 Caenorhabditis elegans
Exon265625   81   X: 17187351-17187431 Caenorhabditis elegans
Exon265627   189   X: 17187493-17187681 Caenorhabditis elegans
Exon265629   467   X: 17187752-17188218 Caenorhabditis elegans
Exon265631   118   X: 17188979-17189096 Caenorhabditis elegans
Exon265633   130   X: 17189145-17189274 Caenorhabditis elegans
Exon265638   227   X: 17190548-17190774 Caenorhabditis elegans
Exon265640   1240   X: 17190844-17192083 Caenorhabditis elegans
Exon265643   301   X: 17192133-17192433 Caenorhabditis elegans
Exon265647   500   X: 17192793-17193292 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0302.1b.1 17186380 17193292 1

1 Sequence

Length
3720

1 Sequence Ontology Term

Identifier Name Description
transcript