WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0302.1a.1 Sequence Name  B0302.1a.1
Length (nt)  4038   Chromosome Location  X: 17186380-17193289
Chromosome . Primary Identifier  X Chromosome Location . Start  17186380
Chromosome Location . End  17193289 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0302.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002207 sid-3 B0302.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0302.1a B0302.1a 3714   X: 17186388-17186537

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0302.1a.1 17186380 17193289 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265616   158   X: 17186380-17186537 Caenorhabditis elegans
Exon265619   168   X: 17186583-17186750 Caenorhabditis elegans
Exon265622   141   X: 17187158-17187298 Caenorhabditis elegans
Exon265624   81   X: 17187351-17187431 Caenorhabditis elegans
Exon265626   189   X: 17187493-17187681 Caenorhabditis elegans
Exon265628   467   X: 17187752-17188218 Caenorhabditis elegans
Exon265630   118   X: 17188979-17189096 Caenorhabditis elegans
Exon265632   130   X: 17189145-17189274 Caenorhabditis elegans
Exon265634   115   X: 17189387-17189501 Caenorhabditis elegans
Exon265635   74   X: 17189547-17189620 Caenorhabditis elegans
Exon265636   132   X: 17190301-17190432 Caenorhabditis elegans
Exon265637   227   X: 17190548-17190774 Caenorhabditis elegans
Exon265639   1240   X: 17190844-17192083 Caenorhabditis elegans
Exon265642   301   X: 17192133-17192433 Caenorhabditis elegans
Exon265646   497   X: 17192793-17193289 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0302.1a.1 17186380 17193289 1

1 Sequence

Length
4038

1 Sequence Ontology Term

Identifier Name Description
transcript