WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41G7.5a.1 Sequence Name  C41G7.5a.1
Length (nt)  1871   Chromosome Location  I: 9522550-9531132
Chromosome . Primary Identifier  I Chromosome Location . Start  9522550
Chromosome Location . End  9531132 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41G7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000096 ahr-1 C41G7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41G7.5a C41G7.5a 1809   I: 9522578-9522615

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41G7.5a.1 9522550 9531132 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25627   66   I: 9522550-9522615 Caenorhabditis elegans
Exon25628   60   I: 9524662-9524721 Caenorhabditis elegans
Exon25630   128   I: 9524948-9525075 Caenorhabditis elegans
Exon25636   402   I: 9527820-9528221 Caenorhabditis elegans
Exon25638   74   I: 9528269-9528342 Caenorhabditis elegans
Exon25640   107   I: 9528853-9528959 Caenorhabditis elegans
Exon25642   99   I: 9529010-9529108 Caenorhabditis elegans
Exon25644   104   I: 9529161-9529264 Caenorhabditis elegans
Exon25646   145   I: 9529319-9529463 Caenorhabditis elegans
Exon25648   150   I: 9529833-9529982 Caenorhabditis elegans
Exon25650   314   I: 9530027-9530340 Caenorhabditis elegans
Exon25652   50   I: 9530386-9530435 Caenorhabditis elegans
Exon25655   172   I: 9530961-9531132 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41G7.5a.1 9522550 9531132 1

1 Sequence

Length
1871

1 Sequence Ontology Term

Identifier Name Description
transcript