WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08G2.3.1 Sequence Name  T08G2.3.1
Length (nt)  1384   Chromosome Location  X: 17213144-17214903
Chromosome . Primary Identifier  X Chromosome Location . Start  17213144
Chromosome Location . End  17214903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020366 acdh-10 T08G2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08G2.3 T08G2.3 1254   X: 17213267-17213428

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08G2.3.1 17213144 17214903 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265643   285   X: 17213144-17213428 Caenorhabditis elegans
Exon265644   177   X: 17213477-17213653 Caenorhabditis elegans
Exon265645   346   X: 17213819-17214164 Caenorhabditis elegans
Exon265647   481   X: 17214213-17214693 Caenorhabditis elegans
Exon265648   95   X: 17214809-17214903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08G2.3.1 17213144 17214903 -1

1 Sequence

Length
1384

1 Sequence Ontology Term

Identifier Name Description
transcript