WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25G12.5.1 Sequence Name  T25G12.5.1
Length (nt)  1344   Chromosome Location  X: 17215018-17217105
Chromosome . Primary Identifier  X Chromosome Location . Start  17215018
Chromosome Location . End  17217105 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25G12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020812 acdh-7 T25G12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25G12.5 T25G12.5 1239   X: 17215120-17215368

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25G12.5.1 17215018 17217105 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265649   351   X: 17215018-17215368 Caenorhabditis elegans
Exon265650   430   X: 17215669-17216098 Caenorhabditis elegans
Exon265651   131   X: 17216479-17216609 Caenorhabditis elegans
Exon265652   432   X: 17216674-17217105 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25G12.5.1 17215018 17217105 -1

1 Sequence

Length
1344

1 Sequence Ontology Term

Identifier Name Description
transcript