WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10D7.1.1 Sequence Name  F10D7.1.1
Length (nt)  2074   Chromosome Location  X: 17359752-17363741
Chromosome . Primary Identifier  X Chromosome Location . Start  17359752
Chromosome Location . End  17363741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10D7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017338 npr-36 F10D7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10D7.1 F10D7.1 1308   X: 17359755-17359886

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10D7.1.1 17359752 17363741 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265804   135   X: 17359752-17359886 Caenorhabditis elegans
Exon265806   156   X: 17360213-17360368 Caenorhabditis elegans
Exon265808   190   X: 17360966-17361155 Caenorhabditis elegans
Exon265810   66   X: 17361199-17361264 Caenorhabditis elegans
Exon265812   271   X: 17361315-17361585 Caenorhabditis elegans
Exon265814   140   X: 17361664-17361803 Caenorhabditis elegans
Exon265816   203   X: 17361849-17362051 Caenorhabditis elegans
Exon265818   474   X: 17362433-17362906 Caenorhabditis elegans
Exon265823   439   X: 17363303-17363741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10D7.1.1 17359752 17363741 1

1 Sequence

Length
2074

1 Sequence Ontology Term

Identifier Name Description
transcript