WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10D7.5c.1 Sequence Name  F10D7.5c.1
Length (nt)  2027   Chromosome Location  X: 17383125-17386535
Chromosome . Primary Identifier  X Chromosome Location . Start  17383125
Chromosome Location . End  17386535 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10D7.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017342 F10D7.5 F10D7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10D7.5c F10D7.5c 1314   X: 17383609-17383761

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10D7.5c.1 17383125 17386535 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265862   637   X: 17383125-17383761 Caenorhabditis elegans
Exon265865   171   X: 17384109-17384279 Caenorhabditis elegans
Exon265867   116   X: 17384332-17384447 Caenorhabditis elegans
Exon265869   327   X: 17384506-17384832 Caenorhabditis elegans
Exon265871   199   X: 17384972-17385170 Caenorhabditis elegans
Exon265873   152   X: 17385265-17385416 Caenorhabditis elegans
Exon265875   162   X: 17385927-17386088 Caenorhabditis elegans
Exon265877   263   X: 17386273-17386535 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10D7.5c.1 17383125 17386535 -1

1 Sequence

Length
2027

1 Sequence Ontology Term

Identifier Name Description
transcript