WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10D7.5a.1 Sequence Name  F10D7.5a.1
Length (nt)  2392   Chromosome Location  X: 17383125-17391615
Chromosome . Primary Identifier  X Chromosome Location . Start  17383125
Chromosome Location . End  17391615 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10D7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017342 F10D7.5 F10D7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10D7.5a F10D7.5a 1854   X: 17383609-17383761

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10D7.5a.1 17383125 17391615 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265863   637   X: 17383125-17383761 Caenorhabditis elegans
Exon265864   171   X: 17384109-17384279 Caenorhabditis elegans
Exon265866   116   X: 17384332-17384447 Caenorhabditis elegans
Exon265868   327   X: 17384506-17384832 Caenorhabditis elegans
Exon265870   199   X: 17384972-17385170 Caenorhabditis elegans
Exon265872   152   X: 17385265-17385416 Caenorhabditis elegans
Exon265874   162   X: 17385927-17386088 Caenorhabditis elegans
Exon265878   88   X: 17386873-17386960 Caenorhabditis elegans
Exon265880   142   X: 17388345-17388486 Caenorhabditis elegans
Exon265883   126   X: 17388534-17388659 Caenorhabditis elegans
Exon265886   58   X: 17388944-17389001 Caenorhabditis elegans
Exon265889   129   X: 17389053-17389181 Caenorhabditis elegans
Exon265897   85   X: 17391531-17391615 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10D7.5a.1 17383125 17391615 -1

1 Sequence

Length
2392

1 Sequence Ontology Term

Identifier Name Description
transcript