WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C7.4.1 Sequence Name  F11C7.4.1
Length (nt)  5606   Chromosome Location  X: 17402532-17414014
Chromosome . Primary Identifier  X Chromosome Location . Start  17402532
Chromosome Location . End  17414014 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000792 crb-1 F11C7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C7.4 F11C7.4 5169   X: 17402804-17402848

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11C7.4.1 17402532 17414014 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265917   317   X: 17402532-17402848 Caenorhabditis elegans
Exon265918   174   X: 17403461-17403634 Caenorhabditis elegans
Exon265919   78   X: 17403968-17404045 Caenorhabditis elegans
Exon265920   113   X: 17404123-17404235 Caenorhabditis elegans
Exon265921   105   X: 17404878-17404982 Caenorhabditis elegans
Exon265922   217   X: 17405062-17405278 Caenorhabditis elegans
Exon265923   507   X: 17405331-17405837 Caenorhabditis elegans
Exon265924   345   X: 17406746-17407090 Caenorhabditis elegans
Exon265925   87   X: 17407138-17407224 Caenorhabditis elegans
Exon265926   191   X: 17407295-17407485 Caenorhabditis elegans
Exon265927   169   X: 17407530-17407698 Caenorhabditis elegans
Exon265928   131   X: 17407746-17407876 Caenorhabditis elegans
Exon265929   190   X: 17407936-17408125 Caenorhabditis elegans
Exon265930   234   X: 17408406-17408639 Caenorhabditis elegans
Exon265931   110   X: 17408685-17408794 Caenorhabditis elegans
Exon265932   164   X: 17409383-17409546 Caenorhabditis elegans
Exon265933   130   X: 17409663-17409792 Caenorhabditis elegans
Exon265934   151   X: 17409837-17409987 Caenorhabditis elegans
Exon265935   96   X: 17410035-17410130 Caenorhabditis elegans
Exon265936   232   X: 17410181-17410412 Caenorhabditis elegans
Exon265937   182   X: 17410461-17410642 Caenorhabditis elegans
Exon265938   114   X: 17410918-17411031 Caenorhabditis elegans
Exon265939   140   X: 17411099-17411238 Caenorhabditis elegans
Exon265940   442   X: 17411329-17411770 Caenorhabditis elegans
Exon265941   96   X: 17411840-17411935 Caenorhabditis elegans
Exon265942   143   X: 17411981-17412123 Caenorhabditis elegans
Exon265943   151   X: 17412623-17412773 Caenorhabditis elegans
Exon265944   100   X: 17412820-17412919 Caenorhabditis elegans
Exon265945   286   X: 17412966-17413251 Caenorhabditis elegans
Exon265947   211   X: 17413804-17414014 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11C7.4.1 17402532 17414014 -1

1 Sequence

Length
5606

1 Sequence Ontology Term

Identifier Name Description
transcript