WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C7.1.1 Sequence Name  F11C7.1.1
Length (nt)  1837   Chromosome Location  X: 17429042-17433544
Chromosome . Primary Identifier  X Chromosome Location . Start  17429042
Chromosome Location . End  17433544 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017375 pbo-6 F11C7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C7.1 F11C7.1 1269   X: 17429169-17429250

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11C7.1.1 17429042 17433544 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265955   209   X: 17429042-17429250 Caenorhabditis elegans
Exon265956   46   X: 17429296-17429341 Caenorhabditis elegans
Exon265957   112   X: 17429392-17429503 Caenorhabditis elegans
Exon265958   110   X: 17429940-17430049 Caenorhabditis elegans
Exon265959   110   X: 17430363-17430472 Caenorhabditis elegans
Exon265960   44   X: 17430718-17430761 Caenorhabditis elegans
Exon265961   99   X: 17430812-17430910 Caenorhabditis elegans
Exon265962   186   X: 17431243-17431428 Caenorhabditis elegans
Exon265963   103   X: 17431874-17431976 Caenorhabditis elegans
Exon265964   80   X: 17432095-17432174 Caenorhabditis elegans
Exon265965   90   X: 17432222-17432311 Caenorhabditis elegans
Exon265966   48   X: 17432850-17432897 Caenorhabditis elegans
Exon265967   600   X: 17432945-17433544 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11C7.1.1 17429042 17433544 1

1 Sequence

Length
1837

1 Sequence Ontology Term

Identifier Name Description
transcript