WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK54.3.3 Sequence Name  ZK54.3.3
Length (nt)  702   Chromosome Location  X: 17465454-17466765
Chromosome . Primary Identifier  X Chromosome Location . Start  17465454
Chromosome Location . End  17466765 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK54.3.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022648 ZK54.3 ZK54.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK54.3 ZK54.3 270   X: 17466072-17466143

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK54.3.3 17465454 17466765 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon266035   50   X: 17465454-17465503 Caenorhabditis elegans
Exon266038   239   X: 17465558-17465796 Caenorhabditis elegans
Exon266042   132   X: 17466012-17466143 Caenorhabditis elegans
Exon266045   137   X: 17466195-17466331 Caenorhabditis elegans
Exon266048   144   X: 17466622-17466765 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK54.3.3 17465454 17466765 -1

1 Sequence

Length
702

1 Sequence Ontology Term

Identifier Name Description
transcript