WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R106.2.1 Sequence Name  R106.2.1
Length (nt)  1493   Chromosome Location  X: 17483008-17486835
Chromosome . Primary Identifier  X Chromosome Location . Start  17483008
Chromosome Location . End  17486835 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R106.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020086 npr-24 R106.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R106.2 R106.2 1122   X: 17483339-17483485

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R106.2.1 17483008 17486835 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon266097   478   X: 17483008-17483485 Caenorhabditis elegans
Exon266098   112   X: 17483540-17483651 Caenorhabditis elegans
Exon266099   98   X: 17484149-17484246 Caenorhabditis elegans
Exon266100   148   X: 17484328-17484475 Caenorhabditis elegans
Exon266102   124   X: 17484521-17484644 Caenorhabditis elegans
Exon266103   353   X: 17485326-17485678 Caenorhabditis elegans
Exon266104   92   X: 17485826-17485917 Caenorhabditis elegans
Exon266105   88   X: 17486748-17486835 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R106.2.1 17483008 17486835 -1

1 Sequence

Length
1493

1 Sequence Ontology Term

Identifier Name Description
transcript