WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09G11.1.1 Sequence Name  R09G11.1.1
Length (nt)  1291   Chromosome Location  X: 17528344-17531985
Chromosome . Primary Identifier  X Chromosome Location . Start  17528344
Chromosome Location . End  17531985 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09G11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006319 sup-10 R09G11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09G11.1 R09G11.1 999   X: 17528410-17528512

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09G11.1.1 17528344 17531985 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon266173   169   X: 17528344-17528512 Caenorhabditis elegans
Exon266174   107   X: 17529278-17529384 Caenorhabditis elegans
Exon266175   189   X: 17530157-17530345 Caenorhabditis elegans
Exon266176   170   X: 17530565-17530734 Caenorhabditis elegans
Exon266177   175   X: 17531278-17531452 Caenorhabditis elegans
Exon266178   481   X: 17531505-17531985 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09G11.1.1 17528344 17531985 1

1 Sequence

Length
1291

1 Sequence Ontology Term

Identifier Name Description
transcript