WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16H3.1a.1 Sequence Name  C16H3.1a.1
Length (nt)  818   Chromosome Location  X: 17614545-17619622
Chromosome . Primary Identifier  X Chromosome Location . Start  17614545
Chromosome Location . End  17619622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16H3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015867 ncs-7 C16H3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16H3.1a C16H3.1a 654   X: 17614545-17614590

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16H3.1a.1 17614545 17619622 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon266264   46   X: 17614545-17614590 Caenorhabditis elegans
Exon266266   125   X: 17618000-17618124 Caenorhabditis elegans
Exon266268   141   X: 17618554-17618694 Caenorhabditis elegans
Exon266270   128   X: 17618767-17618894 Caenorhabditis elegans
Exon266272   85   X: 17618950-17619034 Caenorhabditis elegans
Exon266275   293   X: 17619330-17619622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16H3.1a.1 17614545 17619622 1

1 Sequence

Length
818

1 Sequence Ontology Term

Identifier Name Description
transcript