WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16H3.1b Sequence Name  C16H3.1b
Length (nt)  720   Chromosome Location  X: 17616686-17616797
Chromosome . Primary Identifier  X Chromosome Location . Start  17616686
Chromosome Location . End  17616797
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16H3.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53380 NCS-7, isoform b 27.0 239 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00040747
WBRNAi00010875
WBRNAi00028980

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16H3.1b 17616686 17616797 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015867 ncs-7 C16H3.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16H3.1b 17616686 17616797 1
CDS:C16H3.1b 17618000 17618124 1
CDS:C16H3.1b 17618554 17618694 1
CDS:C16H3.1b 17618767 17618894 1
CDS:C16H3.1b 17618950 17619034 1
CDS:C16H3.1b 17619330 17619458 1

1 Sequence

Length
720

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16H3.1b.1 C16H3.1b.1 1226   X: 17616343-17619621