WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23E7.2a.1 Sequence Name  T23E7.2a.1
Length (nt)  3377   Chromosome Location  X: 17671029-17680793
Chromosome . Primary Identifier  X Chromosome Location . Start  17671029
Chromosome Location . End  17680793 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23E7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020732 T23E7.2 T23E7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23E7.2a T23E7.2a 2967   X: 17671042-17671159

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T23E7.2a.1 17671029 17680793 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon266322   131   X: 17671029-17671159 Caenorhabditis elegans
Exon266333   86   X: 17671206-17671291 Caenorhabditis elegans
Exon266348   90   X: 17673391-17673480 Caenorhabditis elegans
Exon266363   150   X: 17674118-17674267 Caenorhabditis elegans
Exon266371   469   X: 17674359-17674827 Caenorhabditis elegans
Exon266386   304   X: 17674946-17675249 Caenorhabditis elegans
Exon266402   258   X: 17675365-17675622 Caenorhabditis elegans
Exon266413   459   X: 17675764-17676222 Caenorhabditis elegans
Exon266429   222   X: 17676271-17676492 Caenorhabditis elegans
Exon266445   286   X: 17676773-17677058 Caenorhabditis elegans
Exon266461   72   X: 17677173-17677244 Caenorhabditis elegans
Exon266479   102   X: 17678671-17678772 Caenorhabditis elegans
Exon266486   57   X: 17678930-17678986 Caenorhabditis elegans
Exon266502   68   X: 17679252-17679319 Caenorhabditis elegans
Exon266518   114   X: 17679922-17680035 Caenorhabditis elegans
Exon266543   509   X: 17680285-17680793 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T23E7.2a.1 17671029 17680793 1

1 Sequence

Length
3377

1 Sequence Ontology Term

Identifier Name Description
transcript