WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y106G6D.5b.1 Sequence Name  Y106G6D.5b.1
Length (nt)  2377   Chromosome Location  I: 10119191-10122104
Chromosome . Primary Identifier  I Chromosome Location . Start  10119191
Chromosome Location . End  10122104 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6D.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014965 Y106G6D.5 Y106G6D.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y106G6D.5b Y106G6D.5b 1758   I: 10119563-10119659

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6D.5b.1 10119191 10122104 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27161   469   I: 10119191-10119659 Caenorhabditis elegans
Exon27166   127   I: 10119709-10119835 Caenorhabditis elegans
Exon27170   115   I: 10119880-10119994 Caenorhabditis elegans
Exon27176   406   I: 10120039-10120444 Caenorhabditis elegans
Exon27180   299   I: 10120499-10120797 Caenorhabditis elegans
Exon27185   83   I: 10120845-10120927 Caenorhabditis elegans
Exon27190   270   I: 10121038-10121307 Caenorhabditis elegans
Exon27194   80   I: 10121352-10121431 Caenorhabditis elegans
Exon27197   199   I: 10121483-10121681 Caenorhabditis elegans
Exon27202   111   I: 10121734-10121844 Caenorhabditis elegans
Exon27205   218   I: 10121887-10122104 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6D.5b.1 10119191 10122104 -1

1 Sequence

Length
2377

1 Sequence Ontology Term

Identifier Name Description
transcript