WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y106G6G.2.1 Sequence Name  Y106G6G.2.1
Length (nt)  5190   Chromosome Location  I: 10300568-10327870
Chromosome . Primary Identifier  I Chromosome Location . Start  10300568
Chromosome Location . End  10327870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6G.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013711 Y106G6G.2 Y106G6G.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y106G6G.2 Y106G6G.2 4968   I: 10300677-10300972

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6G.2.1 10300568 10327870 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27477   405   I: 10300568-10300972 Caenorhabditis elegans
Exon27478   85   I: 10301268-10301352 Caenorhabditis elegans
Exon27479   124   I: 10301400-10301523 Caenorhabditis elegans
Exon27480   146   I: 10301567-10301712 Caenorhabditis elegans
Exon27481   196   I: 10301761-10301956 Caenorhabditis elegans
Exon27482   243   I: 10302020-10302262 Caenorhabditis elegans
Exon27483   175   I: 10302310-10302484 Caenorhabditis elegans
Exon27498   258   I: 10319695-10319952 Caenorhabditis elegans
Exon27499   520   I: 10320315-10320834 Caenorhabditis elegans
Exon27500   210   I: 10320894-10321103 Caenorhabditis elegans
Exon27501   145   I: 10321147-10321291 Caenorhabditis elegans
Exon27502   110   I: 10321360-10321469 Caenorhabditis elegans
Exon27510   121   I: 10324150-10324270 Caenorhabditis elegans
Exon27511   205   I: 10324314-10324518 Caenorhabditis elegans
Exon27512   171   I: 10324629-10324799 Caenorhabditis elegans
Exon27513   366   I: 10324848-10325213 Caenorhabditis elegans
Exon27514   127   I: 10325258-10325384 Caenorhabditis elegans
Exon27515   191   I: 10325428-10325618 Caenorhabditis elegans
Exon27516   103   I: 10325947-10326049 Caenorhabditis elegans
Exon27517   289   I: 10326097-10326385 Caenorhabditis elegans
Exon27518   177   I: 10326430-10326606 Caenorhabditis elegans
Exon27519   299   I: 10326691-10326989 Caenorhabditis elegans
Exon27520   69   I: 10327149-10327217 Caenorhabditis elegans
Exon27521   132   I: 10327264-10327395 Caenorhabditis elegans
Exon27522   134   I: 10327441-10327574 Caenorhabditis elegans
Exon27523   189   I: 10327682-10327870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6G.2.1 10300568 10327870 -1

1 Sequence

Length
5190

1 Sequence Ontology Term

Identifier Name Description
transcript