WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45H11.4b.1 Sequence Name  F45H11.4b.1
Length (nt)  3090   Chromosome Location  I: 10385155-10391316
Chromosome . Primary Identifier  I Chromosome Location . Start  10385155
Chromosome Location . End  10391316 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H11.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003233 mgl-2 F45H11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45H11.4b F45H11.4b 3090   I: 10385155-10385193

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45H11.4b.1 10385155 10391316 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27746   39   I: 10385155-10385193 Caenorhabditis elegans
Exon27748   213   I: 10385306-10385518 Caenorhabditis elegans
Exon27751   101   I: 10385571-10385671 Caenorhabditis elegans
Exon27754   104   I: 10385860-10385963 Caenorhabditis elegans
Exon27757   303   I: 10386193-10386495 Caenorhabditis elegans
Exon27760   257   I: 10386643-10386899 Caenorhabditis elegans
Exon27763   513   I: 10387243-10387755 Caenorhabditis elegans
Exon27766   187   I: 10388008-10388194 Caenorhabditis elegans
Exon27769   135   I: 10388476-10388610 Caenorhabditis elegans
Exon27772   171   I: 10388660-10388830 Caenorhabditis elegans
Exon27775   448   I: 10389103-10389550 Caenorhabditis elegans
Exon27780   172   I: 10390255-10390426 Caenorhabditis elegans
Exon27783   178   I: 10390477-10390654 Caenorhabditis elegans
Exon27786   155   I: 10390703-10390857 Caenorhabditis elegans
Exon27788   114   I: 10391203-10391316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45H11.4b.1 10385155 10391316 -1

1 Sequence

Length
3090

1 Sequence Ontology Term

Identifier Name Description
transcript