WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22A3.3b.1 Sequence Name  T22A3.3b.1
Length (nt)  1348   Chromosome Location  I: 10588673-10590465
Chromosome . Primary Identifier  I Chromosome Location . Start  10588673
Chromosome Location . End  10590465 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22A3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003083 lst-1 T22A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22A3.3b T22A3.3b 705   I: 10589117-10589479

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.3b.1 10588673 10590465 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28306   75   I: 10588673-10588747 Caenorhabditis elegans
Exon28310   546   I: 10588934-10589479 Caenorhabditis elegans
Exon28312   254   I: 10589562-10589815 Caenorhabditis elegans
Exon28316   473   I: 10589993-10590465 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.3b.1 10588673 10590465 1

1 Sequence

Length
1348

1 Sequence Ontology Term

Identifier Name Description
transcript