WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13H8.1k.1 Sequence Name  R13H8.1k.1
Length (nt)  1458   Chromosome Location  I: 10750960-10775050
Chromosome . Primary Identifier  I Chromosome Location . Start  10750960
Chromosome Location . End  10775050 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H8.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H8.1k R13H8.1k 1458   I: 10750960-10750984

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13H8.1k.1 10750960 10775050 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28708   25   I: 10750960-10750984 Caenorhabditis elegans
Exon28714   151   I: 10751038-10751188 Caenorhabditis elegans
Exon28727   117   I: 10763590-10763706 Caenorhabditis elegans
Exon28737   140   I: 10764357-10764496 Caenorhabditis elegans
Exon28745   74   I: 10765210-10765283 Caenorhabditis elegans
Exon28758   162   I: 10772960-10773121 Caenorhabditis elegans
Exon28770   182   I: 10773284-10773465 Caenorhabditis elegans
Exon28781   220   I: 10773525-10773744 Caenorhabditis elegans
Exon28792   113   I: 10773994-10774106 Caenorhabditis elegans
Exon28798   274   I: 10774777-10775050 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13H8.1k.1 10750960 10775050 1

1 Sequence

Length
1458

1 Sequence Ontology Term

Identifier Name Description
transcript