WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13H8.1b.1 Sequence Name  R13H8.1b.1
Length (nt)  2698   Chromosome Location  I: 10763103-10776702
Chromosome . Primary Identifier  I Chromosome Location . Start  10763103
Chromosome Location . End  10776702 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H8.1b R13H8.1b 1527   I: 10763103-10763347

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13H8.1b.1 10763103 10776702 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28718   245   I: 10763103-10763347 Caenorhabditis elegans
Exon28721   117   I: 10763590-10763706 Caenorhabditis elegans
Exon28735   140   I: 10764357-10764496 Caenorhabditis elegans
Exon28739   74   I: 10765210-10765283 Caenorhabditis elegans
Exon28752   162   I: 10772960-10773121 Caenorhabditis elegans
Exon28763   182   I: 10773284-10773465 Caenorhabditis elegans
Exon28774   220   I: 10773525-10773744 Caenorhabditis elegans
Exon28785   113   I: 10773994-10774106 Caenorhabditis elegans
Exon28802   339   I: 10774777-10775115 Caenorhabditis elegans
Exon28808   1106   I: 10775597-10776702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13H8.1b.1 10763103 10776702 1

1 Sequence

Length
2698

1 Sequence Ontology Term

Identifier Name Description
transcript