WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y52B11A.2a Sequence Name  Y52B11A.2a
Length (nt)  774   Chromosome Location  I: 10966490-10966606
Chromosome . Primary Identifier  I Chromosome Location . Start  10966490
Chromosome Location . End  10966606
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52B11A.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20291 IMPT-1, isoform a 29.6 257 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00057220
WBRNAi00004695
WBRNAi00037385
WBRNAi00112183
WBRNAi00117002
WBRNAi00062449
WBRNAi00112185
WBRNAi00112184

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y52B11A.2a 10966490 10966606 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013122 impt-1 Y52B11A.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y52B11A.2a 10966490 10966606 -1
CDS:Y52B11A.2a 10968146 10968340 -1
CDS:Y52B11A.2a 10968559 10968720 -1
CDS:Y52B11A.2a 10968773 10968920 -1
CDS:Y52B11A.2a 10970015 10970166 -1

1 Sequence

Length
774

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y52B11A.2a.1 Y52B11A.2a.1 950   I: 10966325-10970177