WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56G4.6.1 Sequence Name  F56G4.6.1
Length (nt)  2608   Chromosome Location  I: 11364326-11374334
Chromosome . Primary Identifier  I Chromosome Location . Start  11364326
Chromosome Location . End  11374334 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56G4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010161 F56G4.6 F56G4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56G4.6 F56G4.6 2532   I: 11364386-11364555

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56G4.6.1 11364326 11374334 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29672   230   I: 11364326-11364555 Caenorhabditis elegans
Exon29673   150   I: 11364921-11365070 Caenorhabditis elegans
Exon29674   116   I: 11365131-11365246 Caenorhabditis elegans
Exon29676   326   I: 11366761-11367086 Caenorhabditis elegans
Exon29677   179   I: 11368064-11368242 Caenorhabditis elegans
Exon29678   286   I: 11368345-11368630 Caenorhabditis elegans
Exon29679   197   I: 11370350-11370546 Caenorhabditis elegans
Exon29680   647   I: 11372035-11372681 Caenorhabditis elegans
Exon29681   110   I: 11373714-11373823 Caenorhabditis elegans
Exon29682   235   I: 11373916-11374150 Caenorhabditis elegans
Exon29683   132   I: 11374203-11374334 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56G4.6.1 11364326 11374334 -1

1 Sequence

Length
2608

1 Sequence Ontology Term

Identifier Name Description
transcript