WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H6.5.1 Sequence Name  F56H6.5.1
Length (nt)  1216   Chromosome Location  I: 12292202-12293936
Chromosome . Primary Identifier  I Chromosome Location . Start  12292202
Chromosome Location . End  12293936 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010166 gmd-2 F56H6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H6.5 F56H6.5 1149   I: 12292269-12292331

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H6.5.1 12292202 12293936 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31933   130   I: 12292202-12292331 Caenorhabditis elegans
Exon31934   410   I: 12292379-12292788 Caenorhabditis elegans
Exon31935   331   I: 12293007-12293337 Caenorhabditis elegans
Exon31936   213   I: 12293382-12293594 Caenorhabditis elegans
Exon31937   111   I: 12293755-12293865 Caenorhabditis elegans
Exon31938   21   I: 12293916-12293936 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H6.5.1 12292202 12293936 -1

1 Sequence

Length
1216

1 Sequence Ontology Term

Identifier Name Description
transcript