WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07D10.2b Sequence Name  T07D10.2b
Length (nt)  1209   Chromosome Location  I: 12615957-12616055
Chromosome . Primary Identifier  I Chromosome Location . Start  12615957
Chromosome Location . End  12616055
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D10.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53082 NTR-1, isoform b 45.6 402 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052747
WBRNAi00072224
WBRNAi00004159
WBRNAi00035299

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07D10.2b 12615957 12616055 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011582 ntr-1 T07D10.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07D10.2b 12615957 12616055 1
CDS:T07D10.2b 12621246 12621281 1
CDS:T07D10.2b 12621326 12621469 1
CDS:T07D10.2b 12621583 12622138 1
CDS:T07D10.2b 12622188 12622331 1
CDS:T07D10.2b 12622900 12623038 1
CDS:T07D10.2b 12624100 12624190 1

1 Sequence

Length
1209

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07D10.2b.1 T07D10.2b.1 1296   I: 12615921-12624241