WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0019.1.1 Sequence Name  B0019.1.1
Length (nt)  2356   Chromosome Location  I: 12759587-12764960
Chromosome . Primary Identifier  I Chromosome Location . Start  12759587
Chromosome Location . End  12764960 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0019.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000138 amx-2 B0019.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0019.1 B0019.1 2175   I: 12759756-12759839

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0019.1.1 12759587 12764960 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32968   253   I: 12759587-12759839 Caenorhabditis elegans
Exon32969   65   I: 12759960-12760024 Caenorhabditis elegans
Exon32970   93   I: 12760238-12760330 Caenorhabditis elegans
Exon32971   130   I: 12760376-12760505 Caenorhabditis elegans
Exon32972   71   I: 12760845-12760915 Caenorhabditis elegans
Exon32973   345   I: 12761183-12761527 Caenorhabditis elegans
Exon32974   155   I: 12761810-12761964 Caenorhabditis elegans
Exon32976   142   I: 12762138-12762279 Caenorhabditis elegans
Exon32977   159   I: 12762659-12762817 Caenorhabditis elegans
Exon32978   138   I: 12763123-12763260 Caenorhabditis elegans
Exon32979   208   I: 12763459-12763666 Caenorhabditis elegans
Exon32980   154   I: 12763740-12763893 Caenorhabditis elegans
Exon32981   124   I: 12763990-12764113 Caenorhabditis elegans
Exon32982   181   I: 12764302-12764482 Caenorhabditis elegans
Exon32983   138   I: 12764823-12764960 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0019.1.1 12759587 12764960 -1

1 Sequence

Length
2356

1 Sequence Ontology Term

Identifier Name Description
transcript