WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18D10A.25.2 Sequence Name  Y18D10A.25.2
Length (nt)  1218   Chromosome Location  I: 12915166-12918131
Chromosome . Primary Identifier  I Chromosome Location . Start  12915166
Chromosome Location . End  12918131 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18D10A.25.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001433 fkb-8 Y18D10A.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18D10A.25 Y18D10A.25 873   I: 12916515-12916758

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.25.2 12915166 12918131 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33141   115   I: 12915166-12915280 Caenorhabditis elegans
Exon33142   318   I: 12916441-12916758 Caenorhabditis elegans
Exon33145   200   I: 12917174-12917373 Caenorhabditis elegans
Exon33147   139   I: 12917442-12917580 Caenorhabditis elegans
Exon33149   203   I: 12917634-12917836 Caenorhabditis elegans
Exon33152   243   I: 12917889-12918131 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18D10A.25.2 12915166 12918131 1

1 Sequence

Length
1218

1 Sequence Ontology Term

Identifier Name Description
transcript