WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A8.6.1 Sequence Name  F08A8.6.1
Length (nt)  1202   Chromosome Location  I: 12934764-12937362
Chromosome . Primary Identifier  I Chromosome Location . Start  12934764
Chromosome Location . End  12937362 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006484 tag-138 F08A8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A8.6 F08A8.6 1089   I: 12934767-12935274

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A8.6.1 12934764 12937362 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33167   511   I: 12934764-12935274 Caenorhabditis elegans
Exon33168   380   I: 12936284-12936663 Caenorhabditis elegans
Exon33169   112   I: 12936938-12937049 Caenorhabditis elegans
Exon33170   199   I: 12937164-12937362 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A8.6.1 12934764 12937362 1

1 Sequence

Length
1202

1 Sequence Ontology Term

Identifier Name Description
transcript