WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47B2.2.2 Sequence Name  C47B2.2.2
Length (nt)  1111   Chromosome Location  I: 12962038-12964572
Chromosome . Primary Identifier  I Chromosome Location . Start  12962038
Chromosome Location . End  12964572 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47B2.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008131 C47B2.2 C47B2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47B2.2 C47B2.2 696   I: 12962451-12962655

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47B2.2.2 12962038 12964572 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33253   618   I: 12962038-12962655 Caenorhabditis elegans
Exon33257   82   I: 12962967-12963048 Caenorhabditis elegans
Exon33259   242   I: 12963575-12963816 Caenorhabditis elegans
Exon33260   169   I: 12964404-12964572 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47B2.2.2 12962038 12964572 -1

1 Sequence

Length
1111

1 Sequence Ontology Term

Identifier Name Description
transcript