WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22G12.4a.1 Sequence Name  F22G12.4a.1
Length (nt)  3508   Chromosome Location  I: 13155224-13161508
Chromosome . Primary Identifier  I Chromosome Location . Start  13155224
Chromosome Location . End  13161508 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22G12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009064 F22G12.4 F22G12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22G12.4a F22G12.4a 3324   I: 13155400-13155626

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22G12.4a.1 13155224 13161508 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33647   403   I: 13155224-13155626 Caenorhabditis elegans
Exon33650   104   I: 13155685-13155788 Caenorhabditis elegans
Exon33653   219   I: 13155866-13156084 Caenorhabditis elegans
Exon33656   91   I: 13156144-13156234 Caenorhabditis elegans
Exon33661   373   I: 13156455-13156827 Caenorhabditis elegans
Exon33664   96   I: 13156880-13156975 Caenorhabditis elegans
Exon33667   285   I: 13157030-13157314 Caenorhabditis elegans
Exon33670   244   I: 13157447-13157690 Caenorhabditis elegans
Exon33673   124   I: 13157749-13157872 Caenorhabditis elegans
Exon33676   473   I: 13158299-13158771 Caenorhabditis elegans
Exon33679   178   I: 13158873-13159050 Caenorhabditis elegans
Exon33683   108   I: 13159156-13159263 Caenorhabditis elegans
Exon33686   155   I: 13159643-13159797 Caenorhabditis elegans
Exon33689   189   I: 13159839-13160027 Caenorhabditis elegans
Exon33690   389   I: 13160465-13160853 Caenorhabditis elegans
Exon33692   77   I: 13161432-13161508 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22G12.4a.1 13155224 13161508 -1

1 Sequence

Length
3508

1 Sequence Ontology Term

Identifier Name Description
transcript