WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17B5.6.1 Sequence Name  F17B5.6.1
Length (nt)  1211   Chromosome Location  I: 13201710-13204293
Chromosome . Primary Identifier  I Chromosome Location . Start  13201710
Chromosome Location . End  13204293 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17B5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044058 F17B5.6 F17B5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17B5.6 F17B5.6 1044   I: 13201809-13201872

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17B5.6.1 13201710 13204293 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33813   163   I: 13201710-13201872 Caenorhabditis elegans
Exon33814   89   I: 13202503-13202591 Caenorhabditis elegans
Exon33815   67   I: 13202643-13202709 Caenorhabditis elegans
Exon33816   161   I: 13202876-13203036 Caenorhabditis elegans
Exon33817   114   I: 13203316-13203429 Caenorhabditis elegans
Exon33818   110   I: 13203481-13203590 Caenorhabditis elegans
Exon33819   104   I: 13203639-13203742 Caenorhabditis elegans
Exon33820   168   I: 13203800-13203967 Caenorhabditis elegans
Exon33821   92   I: 13204014-13204105 Caenorhabditis elegans
Exon33822   143   I: 13204151-13204293 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17B5.6.1 13201710 13204293 1

1 Sequence

Length
1211

1 Sequence Ontology Term

Identifier Name Description
transcript