WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40B1A.3d.1 Sequence Name  Y40B1A.3d.1
Length (nt)  1892   Chromosome Location  I: 13347070-13359002
Chromosome . Primary Identifier  I Chromosome Location . Start  13347070
Chromosome Location . End  13359002 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40B1A.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012734 wac-1.1 Y40B1A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40B1A.3d Y40B1A.3d 1554   I: 13347080-13347166

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40B1A.3d.1 13347070 13359002 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34102   97   I: 13347070-13347166 Caenorhabditis elegans
Exon34104   99   I: 13347520-13347618 Caenorhabditis elegans
Exon34108   245   I: 13353001-13353245 Caenorhabditis elegans
Exon34114   166   I: 13354060-13354225 Caenorhabditis elegans
Exon34121   203   I: 13354277-13354479 Caenorhabditis elegans
Exon34126   183   I: 13355612-13355794 Caenorhabditis elegans
Exon34131   134   I: 13356474-13356607 Caenorhabditis elegans
Exon34136   173   I: 13356736-13356908 Caenorhabditis elegans
Exon34141   138   I: 13357727-13357864 Caenorhabditis elegans
Exon34147   454   I: 13358549-13359002 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40B1A.3d.1 13347070 13359002 1

1 Sequence

Length
1892

1 Sequence Ontology Term

Identifier Name Description
transcript