WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01A2.4.1 Sequence Name  C01A2.4.1
Length (nt)  717   Chromosome Location  I: 13392118-13394001
Chromosome . Primary Identifier  I Chromosome Location . Start  13392118
Chromosome Location . End  13394001 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01A2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007216 C01A2.4 C01A2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01A2.4 C01A2.4 624   I: 13392139-13392169

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01A2.4.1 13392118 13394001 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34172   52   I: 13392118-13392169 Caenorhabditis elegans
Exon34173   235   I: 13392271-13392505 Caenorhabditis elegans
Exon34174   151   I: 13393386-13393536 Caenorhabditis elegans
Exon34175   111   I: 13393671-13393781 Caenorhabditis elegans
Exon34176   168   I: 13393834-13394001 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01A2.4.1 13392118 13394001 1

1 Sequence

Length
717

1 Sequence Ontology Term

Identifier Name Description
transcript