WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y87G2A.14.1 Sequence Name  Y87G2A.14.1
Length (nt)  927   Chromosome Location  I: 13492983-13507068
Chromosome . Primary Identifier  I Chromosome Location . Start  13492983
Chromosome Location . End  13507068 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003585 ndx-8 Y87G2A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y87G2A.14 Y87G2A.14 705   I: 13503045-13503128

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.14.1 13492983 13507068 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34308   110   I: 13492983-13493092 Caenorhabditis elegans
Exon34312   99   I: 13503030-13503128 Caenorhabditis elegans
Exon34313   99   I: 13503818-13503916 Caenorhabditis elegans
Exon34314   78   I: 13504892-13504969 Caenorhabditis elegans
Exon34315   104   I: 13505936-13506039 Caenorhabditis elegans
Exon34316   133   I: 13506586-13506718 Caenorhabditis elegans
Exon34317   304   I: 13506765-13507068 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.14.1 13492983 13507068 1

1 Sequence

Length
927

1 Sequence Ontology Term

Identifier Name Description
transcript