WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6B3B.10.1 Sequence Name  Y6B3B.10.1
Length (nt)  1233   Chromosome Location  I: 13724577-13732046
Chromosome . Primary Identifier  I Chromosome Location . Start  13724577
Chromosome Location . End  13732046 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6B3B.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006505 lagr-1 Y6B3B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6B3B.10 Y6B3B.10 1083   I: 13724671-13724823

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3B.10.1 13724577 13732046 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34578   247   I: 13724577-13724823 Caenorhabditis elegans
Exon34579   316   I: 13725498-13725813 Caenorhabditis elegans
Exon34580   187   I: 13726791-13726977 Caenorhabditis elegans
Exon34581   163   I: 13727028-13727190 Caenorhabditis elegans
Exon34582   92   I: 13727577-13727668 Caenorhabditis elegans
Exon34583   100   I: 13728450-13728549 Caenorhabditis elegans
Exon34586   128   I: 13731919-13732046 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3B.10.1 13724577 13732046 -1

1 Sequence

Length
1233

1 Sequence Ontology Term

Identifier Name Description
transcript