WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37A5.1.1 Sequence Name  C37A5.1.1
Length (nt)  1550   Chromosome Location  I: 14158508-14161664
Chromosome . Primary Identifier  I Chromosome Location . Start  14158508
Chromosome Location . End  14161664 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37A5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007988 best-8 C37A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37A5.1 C37A5.1 1539   I: 14158515-14158652

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37A5.1.1 14158508 14161664 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35326   145   I: 14158508-14158652 Caenorhabditis elegans
Exon35327   239   I: 14158800-14159038 Caenorhabditis elegans
Exon35328   71   I: 14159095-14159165 Caenorhabditis elegans
Exon35329   152   I: 14159436-14159587 Caenorhabditis elegans
Exon35330   144   I: 14159869-14160012 Caenorhabditis elegans
Exon35331   311   I: 14160065-14160375 Caenorhabditis elegans
Exon35332   167   I: 14160427-14160593 Caenorhabditis elegans
Exon35333   138   I: 14161243-14161380 Caenorhabditis elegans
Exon35334   122   I: 14161433-14161554 Caenorhabditis elegans
Exon35335   61   I: 14161604-14161664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37A5.1.1 14158508 14161664 -1

1 Sequence

Length
1550

1 Sequence Ontology Term

Identifier Name Description
transcript