WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105E8A.16 Sequence Name  Y105E8A.16
Length (nt)  354   Chromosome Location  I: 14468479-14468592
Chromosome . Primary Identifier  I Chromosome Location . Start  14468479
Chromosome Location . End  14468592
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.16

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29835 RPS-20 13.2 117 Caenorhabditis elegans
 

Other

33 RNAi

WormBase ID
WBRNAi00096667
WBRNAi00096670
WBRNAi00096673
WBRNAi00096676
WBRNAi00096679
WBRNAi00096707
WBRNAi00096710
WBRNAi00096713
WBRNAi00096746
WBRNAi00096748
WBRNAi00096747
WBRNAi00095764
WBRNAi00085421
WBRNAi00026548
WBRNAi00093748
WBRNAi00111127
WBRNAi00081428
WBRNAi00036505
WBRNAi00026549
WBRNAi00000113
WBRNAi00055219
WBRNAi00117174
WBRNAi00096840
WBRNAi00095891
WBRNAi00095968
WBRNAi00096043
WBRNAi00096120
WBRNAi00096197
WBRNAi00096274
WBRNAi00096369

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.16 14468479 14468592 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004489 rps-20 Y105E8A.16 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.16 14468479 14468592 -1
CDS:Y105E8A.16 14468650 14468789 -1
CDS:Y105E8A.16 14468843 14468939 -1
CDS:Y105E8A.16 14469015 14469017 -1

1 Sequence

Length
354

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105E8A.16.1 Y105E8A.16.1 587   I: 14468332-14469103