WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.25d.1 Sequence Name  Y105E8A.25d.1
Length (nt)  2676   Chromosome Location  I: 14567368-14585582
Chromosome . Primary Identifier  I Chromosome Location . Start  14567368
Chromosome Location . End  14585582 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.25d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013682 rhgf-3 Y105E8A.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.25d Y105E8A.25d 2676   I: 14567368-14567497

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.25d.1 14567368 14585582 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35995   130   I: 14567368-14567497 Caenorhabditis elegans
Exon36003   312   I: 14570053-14570364 Caenorhabditis elegans
Exon36009   340   I: 14571439-14571778 Caenorhabditis elegans
Exon36017   222   I: 14572719-14572940 Caenorhabditis elegans
Exon36024   192   I: 14575108-14575299 Caenorhabditis elegans
Exon36031   499   I: 14576119-14576617 Caenorhabditis elegans
Exon36038   689   I: 14577880-14578568 Caenorhabditis elegans
Exon36046   119   I: 14579082-14579200 Caenorhabditis elegans
Exon36054   112   I: 14579463-14579574 Caenorhabditis elegans
Exon36058   61   I: 14585522-14585582 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.25d.1 14567368 14585582 -1

1 Sequence

Length
2676

1 Sequence Ontology Term

Identifier Name Description
transcript