WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39B2.4b Sequence Name  F39B2.4b
Length (nt)  4770   Chromosome Location  I: 14777277-14777402
Chromosome . Primary Identifier  I Chromosome Location . Start  14777277
Chromosome Location . End  14777402
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39B2.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28024 SUR-2, isoform b 184.1 1589 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00066061
WBRNAi00067685
WBRNAi00067862
WBRNAi00115766
WBRNAi00007433
WBRNAi00046757
WBRNAi00025440
WBRNAi00025441
WBRNAi00112421
WBRNAi00003634
WBRNAi00025442
WBRNAi00084990
WBRNAi00064585
WBRNAi00111786
WBRNAi00112412
WBRNAi00091428
WBRNAi00081088
WBRNAi00085248
WBRNAi00116512

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F39B2.4b 14777277 14777402 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006349 sur-2 F39B2.4 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F39B2.4b 14777277 14777402 -1
CDS:F39B2.4b 14778050 14778472 -1
CDS:F39B2.4b 14778905 14779369 -1
CDS:F39B2.4b 14779856 14780137 -1
CDS:F39B2.4b 14780686 14781300 -1
CDS:F39B2.4b 14781349 14781501 -1
CDS:F39B2.4b 14781552 14781663 -1
CDS:F39B2.4b 14781712 14781925 -1
CDS:F39B2.4b 14782338 14782830 -1
CDS:F39B2.4b 14783063 14783436 -1
CDS:F39B2.4b 14783771 14783891 -1
CDS:F39B2.4b 14784380 14784647 -1
CDS:F39B2.4b 14785471 14785643 -1
CDS:F39B2.4b 14785699 14785962 -1
CDS:F39B2.4b 14786961 14787342 -1
CDS:F39B2.4b 14787427 14787620 -1
CDS:F39B2.4b 14787686 14787796 -1

1 Sequence

Length
4770

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39B2.4b.1 F39B2.4b.1 4917   I: 14777137-14787803