WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E5B.2.1 Sequence Name  Y54E5B.2.1
Length (nt)  2708   Chromosome Location  I: 14815656-14820235
Chromosome . Primary Identifier  I Chromosome Location . Start  14815656
Chromosome Location . End  14820235 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5B.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013204 Y54E5B.2 Y54E5B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E5B.2 Y54E5B.2 2586   I: 14815765-14816100

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E5B.2.1 14815656 14820235 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36696   445   I: 14815656-14816100 Caenorhabditis elegans
Exon36697   729   I: 14816727-14817455 Caenorhabditis elegans
Exon36699   249   I: 14817724-14817972 Caenorhabditis elegans
Exon36700   189   I: 14818331-14818519 Caenorhabditis elegans
Exon36701   223   I: 14818567-14818789 Caenorhabditis elegans
Exon36702   333   I: 14819064-14819396 Caenorhabditis elegans
Exon36703   107   I: 14819526-14819632 Caenorhabditis elegans
Exon36704   127   I: 14819702-14819828 Caenorhabditis elegans
Exon36705   98   I: 14819877-14819974 Caenorhabditis elegans
Exon36706   208   I: 14820028-14820235 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E5B.2.1 14815656 14820235 -1

1 Sequence

Length
2708

1 Sequence Ontology Term

Identifier Name Description
transcript