WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31C3.3.1 Sequence Name  F31C3.3.1
Length (nt)  6872   Chromosome Location  I: 15041433-15050700
Chromosome . Primary Identifier  I Chromosome Location . Start  15041433
Chromosome Location . End  15050700 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31C3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009285 bltp-2 F31C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31C3.3 F31C3.3 6399   I: 15041885-15041923

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31C3.3.1 15041433 15050700 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37290   491   I: 15041433-15041923 Caenorhabditis elegans
Exon37291   246   I: 15042662-15042907 Caenorhabditis elegans
Exon37292   192   I: 15042960-15043151 Caenorhabditis elegans
Exon37293   2385   I: 15043201-15045585 Caenorhabditis elegans
Exon37294   455   I: 15045673-15046127 Caenorhabditis elegans
Exon37295   471   I: 15046539-15047009 Caenorhabditis elegans
Exon37296   656   I: 15047091-15047746 Caenorhabditis elegans
Exon37297   462   I: 15048089-15048550 Caenorhabditis elegans
Exon37298   1446   I: 15048977-15050422 Caenorhabditis elegans
Exon37300   68   I: 15050633-15050700 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31C3.3.1 15041433 15050700 -1

1 Sequence

Length
6872

1 Sequence Ontology Term

Identifier Name Description
transcript