WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B12.2.1 Sequence Name  C01B12.2.1
Length (nt)  1452   Chromosome Location  II: 19538-22169
Chromosome . Primary Identifier  II Chromosome Location . Start  19538
Chromosome Location . End  22169 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015285 gmeb-1 C01B12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B12.2 C01B12.2 1125   II: 19538-19750

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B12.2.1 19538 22169 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37388   213   II: 19538-19750 Caenorhabditis elegans
Exon37389   85   II: 20593-20677 Caenorhabditis elegans
Exon37390   106   II: 20721-20826 Caenorhabditis elegans
Exon37391   566   II: 20875-21440 Caenorhabditis elegans
Exon37392   482   II: 21688-22169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B12.2.1 19538 22169 1

1 Sequence

Length
1452

1 Sequence Ontology Term

Identifier Name Description
transcript