WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F23F1.8a.1 Sequence Name  F23F1.8a.1
Length (nt)  1461   Chromosome Location  II: 42207-46216
Chromosome . Primary Identifier  II Chromosome Location . Start  42207
Chromosome Location . End  46216 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F23F1.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004504 rpt-4 F23F1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F23F1.8a F23F1.8a 1221   II: 42363-42481

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F23F1.8a.1 42207 46216 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37433   275   II: 42207-42481 Caenorhabditis elegans
Exon37435   728   II: 42533-43260 Caenorhabditis elegans
Exon37437   353   II: 43310-43662 Caenorhabditis elegans
Exon37450   105   II: 46112-46216 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F23F1.8a.1 42207 46216 -1

1 Sequence

Length
1461

1 Sequence Ontology Term

Identifier Name Description
transcript