WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F23F1.8b Sequence Name  F23F1.8b
Length (nt)  1197   Chromosome Location  II: 42363-42481
Chromosome . Primary Identifier  II Chromosome Location . Start  42363
Chromosome Location . End  42481
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F23F1.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09608 RPT-4, isoform b 44.9 398 Caenorhabditis elegans
 

Other

37 RNAi

WormBase ID
WBRNAi00096602
WBRNAi00095579
WBRNAi00096605
WBRNAi00008690
WBRNAi00085325
WBRNAi00025203
WBRNAi00090985
WBRNAi00089490
WBRNAi00045423
WBRNAi00087977
WBRNAi00076331
WBRNAi00031327
WBRNAi00088810
WBRNAi00088809
WBRNAi00022820
WBRNAi00089494
WBRNAi00088806
WBRNAi00088808
WBRNAi00088807
WBRNAi00089334
WBRNAi00089376
WBRNAi00089457
WBRNAi00089485
WBRNAi00095894
WBRNAi00095971
WBRNAi00096046
WBRNAi00096123
WBRNAi00096200
WBRNAi00096277
WBRNAi00096372

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F23F1.8b 42363 42481 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004504 rpt-4 F23F1.8 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F23F1.8b 42363 42481 -1
CDS:F23F1.8b 42533 43260 -1
CDS:F23F1.8b 43310 43659 -1

1 Sequence

Length
1197

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F23F1.8b.1 F23F1.8b.1 1309   II: 42254-43662